Subscribe here to get periodical Newsletter issues on Microorganisms and Environment Management at free of cost.
DNA Barcoding

 

DNA barcoding is one of the taxonomic tools to identifying the species of same the genus, using a piece of DNA, called mitochondrial gene. In animals, this region is called mitochondrial cytochrome c oxidase 1 gene and in plants, two gene regions in the chloroplast, matK and rbcL, have been used for barcoading. The barcoading of organisms is similar to the black stripes printed on the products in supermarket.

 

 

1)Title: Assessment of the DNA barcoding for identification of Trigonostigma somphongsi, a critically endangered species in Thailand
Author: V.P. Swetha, V.A. Parvathy, T.E. Sheeja, B. Sasikumar
Journal: Biochemical Systematics and Ecology
Year: 2017
View Abstract | Full Paper Request

2)Title: Authentication of Myristica fragrans Houtt. using DNA barcoding
Author: V.P. Swetha, V.A. Parvathy, T.E. Sheeja, B. Sasikumar
Journal: Food Control
Year: 2017
View Abstract | Full Paper Request

3)Title: Descriptive analysis, DNA barcoding and condition index of Penaeids (Crustacea: Decapoda) from the Egyptian Mediterranean coast
Author: Zaki Zaki Sharawya, Eman Mamdouh Abbas, Amal Ragae Khafage, Asmaa Galal-Khallaf, Rania Fahmy Ismail, Hamdy Omar Ahmed, Khaled Mohammed-Geba, Mikio Kato
Journal: Fisheries Research
Year: 2017
View Abstract | Full Paper Request

4)Title: DNA barcoding of fisheries catch to reveal composition and distribution of cutlassfishes along the Taiwan coast
Author: Hui-Yu Wang, Chieh A. Dong, Hsiu-Chin Lin
Journal: Fisheries Research
Year: 2017
View Abstract | Full Paper Request

5)Title: Genetic identification of marine eels through DNA barcoding from Parangipettai coastal waters
Author: Samuel Peninal, Janakiraman Subramanian, Alaganatham Elavarasi, Murugaiyan Kalaiselvam
Journal: Genomics Data
Year: 2017
View Abstract | Full Paper Request

_______________________________________________________________________________________________________________

1)Title: DNA barcoding of fungi causing infections in humans and animals
Author: Laszlo Irinyi, Michaela Lackner, G. Sybren de Hoog, Wieland Meyer
Journal: Fungal Biology
Year: 2016
View Abstract | Full Paper Request

2)Title: Towards more sustainable surimi? PCR-cloning approach for DNA barcoding reveals the use of species of low trophic level and aquaculture in Asian surimi
Author: Asmaa Galal-Khallaf, Alba Ardura, Yaisel J. Borrell, Eva Garcia-Vazquez
Journal: Food Control
Year: 2016
View Abstract | Full Paper Request

3)Title: Review and future prospects for DNA barcoding methods in forensic palynology
Author: Karen L. Bell, Kevin S. Burgess, Kazufusa C. Okamoto, Roman Aranda, Berry J. Brosi
Journal: Forensic Science International: Genetics
Year: 2016
View Abstract | Full Paper Request

4)Title: DNA barcoding reveals mislabeling of imported fish products in Nansha new port of Guangzhou, Guangdong province, China
Author: Shuai Yan, Guiyan Lai, Li Li, Hao Xiao, Ming Zhao, Ming Wang
Journal: Food Chemistry
Year: 2016
View Abstract | Full Paper Request

5)Title: DNA barcoding reveals chaotic labeling and misrepresentation of cod (?, Xue) products sold on the Chinese market
Author: Xiong Xiong, Lisa Guardone, Alice Giusti, Lorenzo Castigliego, Daniela Gianfaldoni, Alessandra Guidi, Armani Andrea
Journal: Food Control
Year: 2016
View Abstract | Full Paper Request

6)Title: DNA barcoding of fungi causing infections in humans and animals
Author: Laszlo Irinyi, Michaela Lackner, G. Sybren de Hoog, Wieland Meyer
Journal: Fungal Biology
Year: 2016
View Abstract | Full Paper Request

7)Title: DNA barcoding for the identification of common economic aquatic products in Central China and its application for the supervision of the market trade
Author: Yanjun Shen, Jingliang Kang, Weitao Chen, Shunping He
Journal: Food Control
Year: 2016
View Abstract | Full Paper Request

8)Title: Detection of mislabelled seafood products in Malaysia by DNA barcoding: Improving transparency in food market
Author: Too Chin Chin, A.B. Adibah, Z.A. Danial Hariz, M.N. Siti Azizah
Journal: Food Control
Year: 2016
View Abstract | Full Paper Request

 

9)Title: DNA barcoding and isolation of vertically transmitted ascomycetes in sorghum from Burkina Faso: Epicoccum sorghinum is dominant in seedlings and appears as a common root pathogen
Author: Michaela S. Stokholm, Ednar G. Wulff, Elisabeth P. Zida, Ibié G. Thio, James B. Néya, Romain W. Soalla, Sylwia E. Glazowska, Marianne Andresen, Henrik B. Topbjerg, Birte Boelt, Ole S. Lund
Journal: Microbiological Research
Year: 2016
View Abstract | Full Paper Request

10)Title: DNA barcoding of earthworms (Eisenia fetida/andrei complex) from 28 ecotoxicological test laboratories
Author: Jörg Römbke, Manuel Aira, Thierry Backeljau, Karin Breugelmans, Jorge Domínguez, Elisabeth Funke, Nadin Graf, Mehrdad Hajibabaei, Marcos Pérez-Losada, Pablo G. Porto, Rüdiger M. Schmelz, Joaquín Vierna, Antón Vizcaíno, Markus Pfenninger
Journal: Applied Soil Ecology
Year: 2016
View Abstract | Full Paper Request

11)Title: First time DNA barcoding of the common shipworm Teredo navalis Linnaeus 1758 (Mollusca: Bivalvia: Teredinidae): Molecular-taxonomic investigation and identification of a widespread wood-borer
Author: Ronny Weigelt, Heike Lippert, Luisa M.S. Borges, Christin Appelqvist, Ulf Karsten, Ralf Bastrop
Journal: Journal of Experimental Marine Biology and Ecology
Year: 2016
View Abstract | Full Paper Request

12)Title: Multiple-stressor effects on stream invertebrates: DNA barcoding reveals contrasting responses of cryptic mayfly species
Author: Jan N. Macher, Romana K. Salis, Katie S. Blakemore, Ralph Tollrian, Christoph D. Matthaei, Florian Leese
Journal: Ecological Indicators
Year: 2016
View Abstract | Full Paper Request

13)Title: DNA barcoding reveals diversity patterns of earthworm communities in remote tropical forests of French Guiana
Author: Thibaud Decaëns, David Porco, Samuel W. James, George G. Brown, Vincent Chassany, Florence Dubs, Lise Dupont, Emmanuel Lapied, Rodolphe Rougerie, Jean-Pierre Rossi, Virginie Roy
Journal: Soil Biology and Biochemistry
Year: 2016
View Abstract | Full Paper Request

14)Title: DNA barcoding reveals mislabeling of game meat species on the U.S. commercial market
Author: Charles A. Quinto, Rebecca Tinoco, Rosalee S. Hellberg
Journal: Food Control
Year: 2016
View Abstract | Full Paper Request

15)Title: Role of DNA barcoding in marine biodiversity assessment and conservation: An update
Author: Subrata Trivedi, Abdulhadi A. Aloufi, Abid A. Ansari, Sankar K. Ghosh
Journal: Saudi Journal of Biological Sciences
Year: 2016
View Abstract | Full Paper Request

16)Title: Detection and characterisation of the biopollutant Xenostrobus securis (Lamarck 1819) Asturian population from DNA Barcoding and eBarcoding
Author: Floriaan Devloo-Delva, Laura Miralles, Alba Ardura, Yaisel J. Borrell, Ivana Pejovic, Valentina Tsartsianidou, Eva Garcia-Vazquez
Journal: Marine Pollution Bulletin
Year: 2016
View Abstract | Full Paper Request

17)Title: Identification of Odontamblyopus lacepedii via morphology and DNA barcoding
Author: Zisha Liu, Na Song, Takashi Yanagimoto, Zhuocheng Zhou, Jinquan Yang, Tianxiang Gao
Journal: Biochemical Systematics and Ecology
Year: 2016
View Abstract | Full Paper Request

18)Title: Identification of Odontamblyopus lacepedii via morphology and DNA barcoding
Author: Luis Romero-Ricardo, Natalia Lastre-Meza, Alveiro Pérez-Doria, Eduar E. Bejarano
Journal: Acta Tropica
Year: 2016
View Abstract | Full Paper Request

19)Title: DNA barcoding of Sri Lankan phlebotomine sand flies using cytochrome c oxidase subunit I reveals the presence of cryptic species
Author: Kanapathy Gajapathy, Tharmatha Tharmasegaram, Thampoe Eswaramohan, Lalanthika B.S.L. Peries, Raveendra Jayanetti, Sinnathamby N. Surendran
Journal: Acta Tropica
Year: 2016
View Abstract | Full Paper Request

20)Title: DNA barcoding reveals substitution of Sablefish (Anoplopoma fimbria) with Patagonian and Antarctic Toothfish (Dissostichus eleginoides and Dissostichus mawsoni) in online market in China: How mislabeling opens door to IUU fishing
Author: Xiong Xiong, Lisa Guardone, María José Cornax, Lara Tinacci, Alessandra Guidi, Daniela Gianfaldoni, Andrea Armani
Journal: Food Control
Year: 2016
View Abstract | Full Paper Request

 

21)Title: Genetic, Genomic, and System Analyses for Pure Cultures and Communities: Protocol – Ultra-High-Throughput Transposon Scanning of Bacterial Genomes
Author: Clémence Roggo, Jan Roelof van der Meer
Journal: Hydrocarbon and Lipid Microbiology Protocols
Year: 2016
View Abstract | Full Paper Request

22)Title: Genetic Fingerprinting Using Microsatellite Markers in a Multiplex PCR Reaction: A Compilation of Methodological Approaches from Primer Design to Detection Systems
Author: Clémence Roggo, Jan Roelof van der Meer
Journal: Genotyping
Year: 2016
View Abstract | Full Paper Request

23)Title: Analysis of the diet of finless porpoise (Neophocaena asiaeorientalis sunameri) based on prey morphological characters and DNA barcoding
Author: Zhichuang Lu, Shengyong Xu, Na Song, Tianxiang Gao, Jiashen Tian, Jiabo Han
Journal: Conservation Genetics Resources
Year: 2016
View Abstract | Full Paper Request

24)Title: Laser capture microdissection microscopy and genome sequencing of the avian malaria parasite, Plasmodium relictum
Author: Holly L. Lutz, Nicholas J. Marra, Felix Grewe, Jenny S. Carlson, Vaidas Palinauskas, Gediminas Valkiunas, Michael J. Stanhope
Journal: Parasitology Research
Year: 2016
View Abstract | Full Paper Request

25)Title: The complete chloroplast genome of Lilium cernuum: genome structure and evolution
Author: Yunpeng Du, Yu BiXuqing Chen, Fengping Yang, Jing Xue, Xiuhai Zhang
Journal: Conservation Genetics Resources
Year: 2016
View Abstract | Full Paper Request

26)Title: The complete mitogenome of a jumping spider Carrhotus xanthogramma (Araneae: Salticidae) and comparative analysis in four salticid mitogenomes
Author: Wen-Yuan Fang, Zheng-Liang Wang, Chao Li, Xiao-Qing Yang, Xiao-Ping Yu
Journal: Conservation Genetics Resources
Year: 2016
View Abstract | Full Paper Request

27)Title: Effect of the edaphic factors and metal content in soil on the diversity of Trichoderma spp
Author: Gordana Racic, Péter Körmöczi, László Kredics, Vera Raicevic, Beba Mutavdžic, Miroslav M. Vrvic, Dejana Pankovic
Journal: Environmental Science and Pollution Research
Year: 2016
View Abstract | Full Paper Request

28)Title: Identification of Colletotrichum spp. associated with fruit rot of Capsicum annuum in North Western Himalayan region of India using fungal DNA barcode markers
Author: Abhishek Katoch, Prachi Sharma, Prem Nath Sharma
Journal: Journal of Plant Biochemistry and Biotechnology
Year: 2016
View Abstract | Full Paper Request

29)Title: DNA-Based Identification of Valeriana officinalis s.l.: a Multiplexed Amplification Refractory Mutation System (MARMS) and High Resolution Melting Curve Analysis (HRMA)
Author: Abhishek Katoch, Prachi Sharma, Prem Nath Sharma
Journal: Plant Molecular Biology Reporter
Year: 2016
View Abstract | Full Paper Request

30)Title: Methods for delimiting species via population genetics and phylogenetics using genotype data
Author: Abhishek Katoch, Prachi Sharma, Prem Nath Sharma
Journal: Genes & Genomics
Year: 2016
View Abstract | Full Paper Request

31)Title: Nitrogen fertilization affects bacteria utilizing plant-derived carbon in the rhizosphere of beech seedlings
Author: Silvia Gschwendtner, Marion Engel, Tillmann Lueders, Franz Buegger, Michael Schloter
Journal: Plant and Soil
Year: 2016
View Abstract | Full Paper Request

32)Title: Assessment of the impact of the fumigant dimethyl disulfide on the dynamics of major fungal plant pathogens in greenhouse soils
Author: C. Papazlatani, C. Rousidou, A. Katsoula, M. Kolyvas, S. Genitsaris, K. K. Papadopoulou, Dimitrios G. Karpouzas
Journal: European Journal of Plant Pathology
Year: 2016
View Abstract | Full Paper Request

33)Title: Acrolein increases macrophage atherogenicity in association with gut microbiota remodeling in atherosclerotic mice: protective role for the polyphenol-rich pomegranate juice
Author: Oren Rom, Hila Korach-Rechtman, Tony Hayek, Yael Danin-Poleg, Haim Bar, Yechezkel Kashi, Michael Aviram
Journal: Archives of Toxicology
Year: 2016
View Abstract | Full Paper Request

34)Title: Gutsy genetics: identification of digested piscine prey items in the stomach contents of sympatric native and introduced warmwater catfishes via DNA barcoding
Author: Robert Aguilar, Matthew B. Ogburn, Amy C. Driskell, Lee A. Weigt, Mary C. Groves, Anson H. Hines
Journal: Environmental Biology of Fishes
Year: 2016
View Abstract | Full Paper Request

_______________________________________________________________________________________________________________

1)Title: Ancient and modern environmental DNA
Author: Mikkel Winther Pedersen, Søren Overballe-Petersen, Luca Ermini, Clio Der Sarkissian, James Haile, Micaela Hellstrom, Johan Spens, Philip Francis Thomsen, Kristine Bohmann, Enrico Cappellini, Ida Bærholm Schnell, Nathan A. Wales, Christian Carøe, Paula F. Campos1, Astrid M. Z. Schmidt, M. Thomas P. Gilbert, Anders J. Hansen, Ludovic Orlando, Eske Willerslev
Journal: Philosophical Transactions of the Royal Society
Year: 2015
View Abstract | Full Paper Request

2)Title: Choice of Next-Generation Sequencing Pipelines
Author: F. Del Chierico, M. Ancora, M. Marcacci, C. Cammà, L. Putignani, Salvatore Conti
Journal: Bacterial Pangenomics
Year: 2015
View Abstract

3)Title: Evolution and Conservation of Central African Biodiversity: Priorities for Future Research and Education in the Congo Basin and Gulf of Guinea
Author: Nicola M. Anthony, Christiane Atteke, Michael W. Bruford, Francisco Dallmeier, Adam Freedman, Olivier Hardy, Brama Ibrahim, Kathryn J. Jeffery, Mireille Johnson, Sally A. Lahm, Nicaise Lepengue, Jacob H. Lowenstein, Fiona Maisels, Jean-François Mboumba, Patrick Mickala, Katy Morgan, Stephan Ntie, Thomas B. Smith, John P. Sullivan, Erik Verheyen and Mary K. Gonder
Journal: Biotropica
Year: 2015
View Abstract | Full Paper Request

4)Title: Next-Generation Sequencing: A Review of Technologies and Tools for Wound Microbiome Research
Author: Brendan P. Hodkinson, Elizabeth A. Grice
Journal: Advances in Wound Care
Year: 2015
View Abstract | Full Paper Request

5)Title: Pyrosequencing Reveals Fungal Communities in the Rhizosphere of Xinjiang Jujube
Author: Peng Liu, Xiao-Hui Wang, Jian-Gui Li, Wei Qin, Cheng-Ze Xiao, Xu Zhao, Hong-Xia Jiang, Jun-Kang Sui, Rong-Bo Sa, Wei-Yan Wang, Xun-Li Liu
Journal: BioMed Research International
Year: 2015
View Abstract | Full Paper Request

6)Title: Rapid and Sensitive Identification of the Herbal Tea Ingredient Taraxacum formosanum Using Loop-Mediated Isothermal Amplification
Author: Guan-Hua Lai, Jung Chao , Ming-Kuem Lin , Wen-Te Chang , Wen-Huang Peng , Fang-Chun Sun , Meng-Shiunn Lee, Meng-Shiou Lee
Journal: International Journal of Molecular Sciences
Year: 2015
View Abstract | Full Paper Request

7)Title: Soil biodiversity and DNA barcodes: opportunities and challenges
Author: Alberto Orgiazzi, Martha Bonnet Dunbar, Panos Panagos, Gerard Arjen de Groot, Philippe Lemanceau
Journal: Soil Biology and Biochemistry
Year: 2015
View Abstract | Full Paper Request

8)Title: The Role of Host Phylogeny Varies in Shaping Microbial Diversity in the Hindguts of Lower Termites
Author: Vera Tai, Erick R. James, Christine A. Nalepa, Rudolf H. Scheffrahn, Steve J. Perlman, Patrick J. Keeling
Journal: Applied and Environmental Microbiology
Year: 2015
View Abstract | Full Paper Request

9)Title: Tracing the origin of raw milk from farm by using Automated Ribosomal Intergenic Spacer Analysis (ARISA) fingerprinting of microbiota
Author: Maria Feligini, Simona Panelli, Roberto Sacchi, Michele Ghitti, Enrica Capelli
Journal: Food Control
Year: 2015
View Abstract | Full Paper Request

10)Title: Study of microbial proliferation and the in vitro antibacterial traits of commonly available flowers in Dhaka Metropolis
Author: Marufa Sharmin, Prangan Das Banya, Laboni Paul, Fouzia Ferdows Khan Chowdhury, Sarah Afrin, Mrityunjoy Acharjee, Tasmina Rahman, Rashed Noor
Journal: Asian Pacific Journal of Tropical Disease
Year: 2015
View Abstract | Full Paper Request

11)Title: Discordance between morphological and molecular species boundaries among Caribbean species of the reef sponge Callyspongia
Author: Melissa B. DeBiasse, Michael E. Hellberg
Journal: Ecology and Evolution
Year: 2015
View Abstract | Full Paper Request

 

12)Title: DNA barcoding and metabarcoding of standardized samples reveal patterns of marine benthic diversity
Author: Matthieu Leray and Nancy Knowlton
Journal: PNAS
Year: 2015
View Abstract | Full Paper Request

13)Title: DNA Barcoding identification of commercialized seafood in South Brazil: A governmental regulatory forensic program
Author: Daniel Cardoso Carvalho, Rafael Melo Palhares, Marcela Gonçalves Drummond, Tiago Bolan Frigo
Journal: PNAS
Year: 2015
View Abstract | Full Paper Request

14)Title: High-throughput DNA barcoding for ecological network studies
Author: Hirokazu Toju
Journal: Population Ecology
Year: 2015
View Abstract | Full Paper Request

15)Title: DNA barcodes for ecology, evolution, and conservation
Author: W. John Kress, Carlos García-Robledo, Maria Uriarte, David L. Erickson
Journal: Trends in Ecology & Evolution
Year: 2015
View Abstract | Full Paper Request

16)Title: DNA barcoding of fungi causing infections in humans and animals
Author: Laszlo Irinyi, Michaela Lackner, Sybren de Hoog, Wieland Meyer
Journal: Fungal Biology
Year: 2015
View Abstract | Full Paper Request

17)Title: Quantitative evaluation of bias in PCR amplification and next-generation sequencing derived from metabarcoding samples
Author: Marta Pawluczyk, Julia Weiss, Matthew G. Links, Mikel Egaña Aranguren, Mark D. Wilkinson, Marcos Egea-Cortines
Journal: Analytical and Bioanalytical Chemistry
Year: 2015
View Abstract | Full Paper Request

18)Title: Towards the unification of sequence-based classification and sequence-based identification of host-associated microorganisms
Author: Joshua R. Herr, Maarja Öpik and David S. Hibbett
Journal: New Phytologist
Year: 2015
View Abstract | Full Paper Request

19)Title: Web Resources for Microbial Data
Author: Qinglan Sun, Li Liu, Linhuan Wu, Wei Li, Quanhe Liu, Jianyuan Zhang, Di Liu, Juncai Ma
Journal: Genomics, Proteomics & Bioinformatics
Year: 2015
View Abstract | Full Paper Request

20)Title: Q-Bank Phytoplasma: A DNA Barcoding Tool for Phytoplasma Identification
Author: Nicoletta Contaldo, Samanta Paltrinieri, Olga Makarova, Assunta Bertaccini, Mogens Nicolaisen
Journal: Plant Pathology
Year: 2015
View Abstract

21)Title: Not all are free-living: high-throughput DNA metabarcoding reveals a diverse community of protists parasitizing soil metazoa
Author: S. Geisen, I. Laros, A. Vizcaíno, M. Bonkowski and G.A. de Groot
Journal: Molecular Ecology
Year: 2015
View Abstract | Full Paper Request

22)Title: Engineering Nanoparticle-Coated Bacteria as Oral DNA Vaccines for Cancer Immunotherapy
Author: Qinglian Hu, Min Wu, Chun Fang, Changyong Cheng, Mengmeng Zhao, Weihuan Fang, Paul K. Chu, Yuan Ping, and Guping Tang
Journal: Nano Letters
Year: 2015
View Abstract | Full Paper Request

23)Title: Population Structure of Endomicrobia in Single Host Cells of Termite Gut Flagellates (Trichonympha spp.)
Author: Hao Zheng, Carsten Dietrich, Claire L. Thompson, Katja Meuser, and Andreas Brune
Journal: Microbes and Environments
Year: 2015
View Abstract | Full Paper Request

24)Title: Massively parallel multiplex DNA sequencing for specimen identification using an Illumina MiSeq platform
Author: Shadi Shokralla, Teresita M. Porter, Joel F. Gibson, Rafal Dobosz, Daniel H. Janzen, Winnie Hallwachs, G. Brian Golding & Mehrdad Hajibabaei
Journal: Scientific Reports
Year: 2015
View Abstract | Full Paper Request

25)Title: Biodiversity and succession of mycobiota associated to agricultural lignocellulosic waste-based composting
Author: Juan Antonio López-González, María del Carmen Vargas-García, María José López, Francisca Suárez-Estrella, Macarena del Mar Jurado, Joaquín Moreno
Journal: Bioresource Technology
Year: 2015
View Abstract | Full Paper Request

26)Title: Efficient and sensitive identification and quantification of airborne pollen using next-generation DNA sequencing
Author: Ken Kraaijeveld, Letty A. de Weger, Marina Ventayol García, Henk Buermans, Jeroen Frank, Pieter S. Hiemstra and Johan T. den Dunnen
Journal: Molecular Ecology Resources
Year: 2015
View Abstract | Full Paper Request

27)Title: Total Concentrations of Virus and Bacteria in Indoor and Outdoor Air
Author: Aaron J. Prussin , II, Ellen B. Garcia , and Linsey C. Marr
Journal: Environmental Science & Technology Letters
Year: 2015
View Abstract | Full Paper Request

28)Title: Interbreeding among deeply divergent mitochondrial lineages in the American cockroach (Periplaneta americana)
Author: Christoph von Beeren, Mark Y. Stoeckle, Joyce Xia, Griffin Burke & Daniel J. C. Kronauer
Journal: Scientific Reports
Year: 2015
View Abstract | Full Paper Request

29)Title: What barcode sequencing reveals about the shark fishery in Peru
Author: Ximena Velez-Zuazo, Joanna Alfaro-Shigueto, Jeffrey Mangel, Riccardo Papa, Ingi Agnarsson
Journal: Fisheries Research
Year: 2015
View Abstract | Full Paper Request

30)Title: A DNA Barcoding system integrating multigene sequence data
Author: Douglas Chesters, Wei-Min Zheng and Chao-Dong Zhu
Journal: Methods in Ecology and Evolution
Year: 2015
View Abstract | Full Paper Request

31)Title: Microbial communities on flower surfaces act as signatures of pollinator visitation
Author: Masayuki Ushio, Eri Yamasaki, Hiroyuki Takasu, Atsushi J. Nagano, Shohei Fujinaga, Mie N. Honjo, Mito Ikemoto, Shoko Sakai & Hiroshi Kudoh
Journal: Scientific Reports
Year: 2015
View Abstract | Full Paper Request

 

32)Title: Morphostructural analysis of the male reproductive system and DNA barcoding in Balclutha brevis Lindberg 1954 (Homoptera, Cicadellidae)
Author: D.G.M. Vitale, R. Viscuso, V. D'Urso, S. Gibilras, A. Sardella, A. Marletta, A.M. Pappalardo
Journal: Micron
Year: 2015
View Abstract | Full Paper Request

33)Title: Genetic approach for species identification: Forensic application of DNA barcoding
Author: A. Verzeletti, V. Cortellini, S. Cisana, S. Pretto, N. Cerri, F. De Ferrari
Journal: Forensic Science International: Genetics Supplement Series
Year: 2015
View Abstract | Full Paper Request

34)Title: Unravelling the riddle of Radix: DNA barcoding for species identification of freshwater snail intermediate hosts of zoonotic digeneans and estimating their inter-population evolutionary relationships
Author: Scott P. Lawton, Rivka M. Lim, Juliet P. Dukes, Stephen M. Kett, , Richard T. Cook, , Anthony J. Walker, Ruth S. Kirk
Journal: Infection, Genetics and Evolution
Year: 2015
View Abstract | Full Paper Request

35)Title: DNA barcoding and haplotyping in different species of Andrographis
Author: Rajender Goud Arolla, Neeraja Cherukupalli, Venkateswara Rao Khareedu, Dashavantha Reddy Vudem
Journal: Biochemical Systematics and Ecology
Year: 2015
View Abstract | Full Paper Request

36)Title: Species identification in fish fillet products using DNA barcoding
Author:  Angela Di Pinto, Patrizia Marchetti, Anna Mottola, Giancarlo Bozzo, Elisabetta Bonerba, Edmondo Ceci, Marilisa Bottaro, Giuseppina Tantillo
Journal: Fisheries Research
Year: 2015
View Abstract | Full Paper Request

37)Title: Unmasking seafood mislabeling in U.S. markets: DNA barcoding as a unique technology for food authentication and quality control
Author: Ramin Khaksar, Traci Carlson, Donald W. Schaffner, Mahni Ghorashi, Dieter Best, Srikanth Jandhyala, Julie Traverso, Sasan Amini
Journal: Food Control
Year: 2015
View Abstract | Full Paper Request

38)Title: DNA barcoding of genus Metapenaeopsis (Decapoda: Penaeidae) and molecular phylogeny inferred from mitochondrial and nuclear DNA sequences
Author: Jiao Cheng, Zhong-li Sha, Rui-yu Liu
Journal: Biochemical Systematics and Ecology
Year: 2015
View Abstract | Full Paper Request

39)Title: Performance of cytochrome c oxidase subunit I (COI), ribosomal DNA Large Subunit (LSU) and Internal Transcribed Spacer 2 (ITS2) in DNA barcoding of Collembola
Author: Sten Anslana, Leho Tedersoo
Journal: European Journal of Soil Biology
Year: 2015
View Abstract | Full Paper Request

40)Title: DNA barcoding in medicinal plants: Testing the potential of a proposed barcoding marker for identification of Uncaria species from China
Author: Zhong-Lian Zhang, Mei-Fang Song, Yan-Hong Guan, Hai-Tao Li, Ying-Feng Niu, Li-Xia Zhang, Xiao-Jun Ma
Journal: Biochemical Systematics and Ecology
Year: 2015
View Abstract | Full Paper Request

41)Title: Environmental DNA COI barcoding for quantitative analysis of protists communities: A test using the Nebela collaris complex (Amoebozoa; Arcellinida; Hyalospheniidae)
Author: Anush Kosakyan, Matthieu Mulot, Edward A.D. Mitchell, Enrique Lara
Journal: European Journal of Protistology
Year: 2015
View Abstract | Full Paper Request

42)Title: DNA barcoding and phylogeny in neotropical species of the genus Spondias
Author: Jéssica Naiana Silva, Aline Bezerra da Costa, José Vieira Silva, Cicero Almeida
Journal: Biochemical Systematics and Ecology
Year: 2015
View Abstract | Full Paper Request

43)Title: DNA barcoding and phylogeny in neotropical species of the genus Spondias
Author: Dilnora E. Gouliamova, Roumen A. Dimitrov, Maudy Th. Smith, Marizeth Groenewald, Margarita M. Stoilova-Disheva, Borislav V. Guéorguiev, Teun Boekhout
Journal: Fungal Biology
Year: 2015
View Abstract | Full Paper Request

44)Title: Towards proteomic species barcoding of fungi – An example using Scedosporium/Pseudallescheria complex isolates
Author: Mareike Bernharda, Andreas Erich Zautner, Joerg Steinmann, Michael Weig, Uwe Groß, Oliver Bader
Journal: Fungal Biology
Year: 2015
View Abstract | Full Paper Request

45)Title: DNA barcoding to assess species adulteration in raw drug trade of “Bala” (genus: Sida L.) herbal products in South India
Author: J.U. Santhosh Kumar, V. Krishna, G.S. Seethapathy, U. Senthilkumar, S. Ragupathy, K.N. Ganeshaiah, R. Ganesan, Steven G. Newmaster, G. Ravikanth, R. Uma Shaanker
Journal: Biochemical Systematics and Ecology
Year: 2015
View Abstract | Full Paper Request

46)Title: Genetic homogeneity in the commercial pink shrimp Farfantepenaeus paulensis revealed by COI barcoding gene
Author: S.S.A. Teodoro, M. Terossi, R.C. Costa, F.L. Mantelatto
Journal: Estuarine, Coastal and Shelf Science
Year: 2015
View Abstract | Full Paper Request

47)Title: Development of new barcoding loci in gall-forming aphids (Eriosomatinae: Eriosomatini): Comparing three mitochondrial genes, ATP6, ATP8, and COI
Author: Wonhoon Lee, Shin-Ichi Akimoto
Journal: Journal of Asia-Pacific Entomology
Year: 2015
View Abstract | Full Paper Request

48)Title: Droplet Barcoding for Single-Cell Transcriptomics Applied to Embryonic Stem Cells
Author: Allon M. Klein, Linas Mazutis, Ilke Akartuna, Naren Tallapragada, Adrian Veres, Victor Li, Leonid Peshkin, David A. Weitz, Marc W. Kirschner
Journal: Cell
Year: 2015
View Abstract | Full Paper Request

49)Title: DNA barcode assessment of Mediterranean mayflies (Ephemeroptera), benchmark data for a regional reference library for rapid biomonitoring of freshwaters
Author: Simone Cardoni, Roberta Tenchini, Irene Ficulle, Roberta Piredda, Marco Cosimo Simeone, Carlo Belfiore
Journal: Biochemical Systematics and Ecology
Year: 2015
View Abstract | Full Paper Request

50)Title: Search of optimal locations for species- or group-specific primer design in DNA sequences: Non-dominated Sorting Genetic Algorithm II (NSGA-II)
Author: Kwang-Seuk Jeong, MinHyeok Kim, Hyunbin Jo, Jeong-An Gim, Dong-Kyun Kim, Gea-Jae Joo
Journal: Ecological Informatics
Year: 2015
View Abstract | Full Paper Request

51)Title: Emerging DNA-based technologies to characterize food ecosystems
Author: Andrea Galimberti, Antonia Bruno, Valerio Mezzasalma, Fabrizio De Mattia, Ilaria Bruni, Massimo Labra
Journal: Food Research International
Year: 2015
View Abstract | Full Paper Request

_______________________________________________________________________________________________________________

1)Title: Combining real-time PCR and next-generation DNA sequencing to provide quantitative comparisons of fungal aerosol populations
Author: Karen C. Dannemiller, Naama Lang-Yona, Naomichi Yamamoto, Yinon Rudich, Jordan Peccia
Journal: Atmospheric Environment
Year: 2014
View Abstract | Full Paper Request

2)Title: Distribution of antibiotic-resistant bacteria in chicken manure and manure-fertilized vegetables
Author:  Qingxiang Yang, Siwei Ren, Tianqi Niu, Yuhui Guo, Shiyue Qi, Xinkuan Han, Dong Liu, Feng Pan
Journal: Environmental Science and Pollution Research
Year: 2014
View Abstract | Full Paper Request

3)Title: Diversity and distribution of eukaryotic microbes in and around a brine pool adjacent to the Thuwal cold seeps in the Red Sea
Author: YongWang, WeiPengZhang, HuiLuoCao, ChunShumShek, RenMaoTian, YueHimWong, Zenon Batang, AbdulazizAl-Suwailem and Pei-YuanQian
Journal: Frontiers in Microbiology
Year: 2014
View Abstract | Full Paper Request

4)Title: Environmental Conditions Influence eDNA Persistence in Aquatic Systems
Author: Matthew A. Barnes, Cameron R. Turner,Christopher L. Jerde, Mark A. Renshaw, W. Lindsay Chadderton, David M. Lodge
Journal: Environmental Science & Technology
Year: 2014
View Abstract | Full Paper Request

5)Title: Morphological and molecular marker contributions to disentangling the cryptic Hermeuptychia hermes species complex (Nymphalidae: Satyrinae: Euptychiina)
Author: N. Seraphim, M. A. Marín, A. V. L. Freitas, K. L. Silva-Brandão
Journal: Molecular Ecology Resources
Year: 2014
View Abstract | Full Paper Request

6)Title: Metagenomic Approach Yields Insights into Fungal Diversity and Functioning
Author: Teiji Sota, Hideki Kagata, Yoshino Ando, Shunsuke Utsumi, Takashi Osono
Journal: Springer Briefs in Biology
Year: 2014
View Abstract | Full Paper Request

7)Title: Molecular Characterization of Skin Microbiota Between Cancer Cachexia Patients and Healthy Volunteers
Author: Wei Li, Lei Han, Pengbo Yu, Chaofeng Ma, Xiaokang Wu, John E. Moore, Jiru Xu
Journal: Microbial Ecology
Year: 2014
View Abstract | Full Paper Request

8)Title: Rhizopogon togasawariana sp. nov., the first report of Rhizopogon associated with an Asian species of Pseudotsuga
Author: Alija Bajro Mujic, Kentaro Hosaka, Joseph W. Spatafora
Journal: Mycologia
Year: 2014
View Abstract | Full Paper Request

9)Title: Rumen Methanogenic Genotypes Differ in Abundance According to Host Residual Feed Intake Phenotype and Diet Type
Author: Ciara A. Carberry, Sinead M. Waters, David A. Kenny, Christopher J. Creevey
Journal: Applied & Environmental Microbiology
Year: 2014
View Abstract | Full Paper Request

10)Title: Simultaneous profiling of seed-associated bacteria and fungi reveals antagonistic interactions between microorganisms within a shared epiphytic microbiome on Triticum and Brassica seeds
Author: Matthew G. Links, Tigst Demeke, Tom Gräfenhan, Janet E. Hill, Sean M. Hemmingsen, Tim J. Dumonceaux
Journal: New Phytologist
Year: 2014
View Abstract | Full Paper Request

11)Title: Single-Cell Analyses Revealed Transfer Ranges of IncP-1, IncP-7, and IncP-9 Plasmids in a Soil Bacterial Community
Author: Masaki Shintani, Kazuhiro Matsui, Jun-ichi Inoue, Akira Hosoyama, Shoko Ohji, Atsushi Yamazoe, Hideaki Nojiri, Kazuhide Kimbara, Moriya Ohkuma
Journal: Applied & Environmental Microbiology
Year: 2014
View Abstract | Full Paper Request

12)Title: Technology and Techniques for Microbial Ecology via DNA Sequencing
Author: William A. Walters, Rob Knight
Journal: Annals of the American Thoracic Society
Year: 2014
View Abstract | Full Paper Request

13)Title: Temporal changes in particle-associated microbial communities after interception by nonlethal sediment traps
Author: Gary R. LeCleir, Jennifer M. DeBruyn, Elizabeth W. Maas, Philip W. Boyd, Steven W. Wilhelm
Journal: Annals of the American Thoracic Society
Year: 2014
View Abstract | Full Paper Request

14)Title: Using microwaves to prepare gastropods for DNA Barcoding
Author: L A. Galindo, N Puillandre, E E. Strong, P Bouchet
Journal: Molecular Ecology Resources
Year: 2014
View Abstract | Full Paper Request

 

15)Title: Next-generation DNA barcoding: using next-generation sequencing to enhance and accelerate DNA barcode capture from single specimens
Author: Shadi Shokralla, Joel F. Gibson, Hamid Nikbakht, Daniel H. Janzen, Winnie Hallwachs and Mehrdad Hajibabaei
Journal: Molecular Ecology Resources
Year: 2014
View Abstract | Full Paper Request

16)Title: DNA barcoding to map the microbial communities: current advances and future directions
Author: Chiranjib Chakraborty, C. George Priya Doss, Bidhan C. Patra, Sanghamitra Bandyopadhyay
Journal: Applied Microbiology and Biotechnology
Year: 2014
View Abstract | Full Paper Request

17)Title: VIP Barcoding: composition vector-based software for rapid species identification based on DNA barcoding
Author: Long Fan, Jerome H. L. Hui, Zu Guo Yu and Ka Hou Chu
Journal: Molecular Ecology Resources
Year: 2014
View Abstract | Full Paper Request

18)Title: Comparative studies on species identification of Noctuoidea moths in two nature reserve conservation zones (Beijing, China) using DNA barcodes and thin-film biosensor chips
Author: F. Yang, Z. Y. Shi, S. L. Bai, R. D. Ward and A. B. Zhang
Journal: Molecular Ecology Resources
Year: 2014
View Abstract | Full Paper Request

19)Title: Multiplexing clonality: combining RGB marking and genetic barcoding
Author: Kerstin Cornils, Lars Thielecke, Svenja Hüser, Michael Forgber, Michael Thomaschewski, Nadja Kleist, Kais Hussein, Kristoffer Riecken, Tassilo Volz, Sebastian Gerdes, Ingmar Glauche, Andreas Dahl, Maura Dandri, Ingo Roeder and Boris Fehse
Journal: Nucleic Acids Research
Year: 2014
View Abstract | Full Paper Request

20)Title: Detecting the Nonviable and Heat-Tolerant Bacteria in Activated Sludge by Minimizing DNA from Dead Cells
Author: Feng Guo, Tong Zhang
Journal: Microbial Ecology
Year: 2014
View Abstract | Full Paper Request

21)Title: Integrating genomics into the taxonomy and systematics of the Bacteria and Archaea
Author: Jongsik Chun and Fred A. Rainey
Journal: International Journal of Systematic and Evolutionary Microbiology
Year: 2014
View Abstract | Full Paper Request

22)Title: Paramecium putrinum (Ciliophora, Protozoa): The first insight into the variation of two DNA fragments – Molecular support for the existence of cryptic species
Author: Sebastian Tarcz, Maria Rautian, Alexey Potekhin, Natalia Sawka, Alexandra Beliavskaya, Andrey Kiselev, Irina Nekrasova, Ewa Przybos
Journal: Molecular Phylogenetics and Evolution
Year: 2014
View Abstract | Full Paper Request

23)Title: Industrial yeasts strains for biorefinery solutions: Constructing and selecting efficient barcoded xylose fermenting strains for ethanol
Author: Elia Tomás-Pejó, Nicklas Bonander andLisbeth Olsson
Journal: Biofuels, Bioproducts and Biorefining
Year: 2014
View Abstract | Full Paper Request

24)Title: Fungal pathogen accumulation at the expense of plant-beneficial fungi as a consequence of consecutive peanut monoculturing
Author: Xiao-gang Li, Chang-feng Ding, Tao-lin Zhang, Xing-xiang Wang
Journal: Soil Biology and Biochemistry
Year: 2014
View Abstract | Full Paper Request

 

25)Title: Antifungal activity of metabolites of the endophytic fungus Trichoderma brevicompactumfrom garlic
Author: Xuping Shentu; Xiaohuan Zhan; Zheng Ma; Xiaoping Yu; Chuanxi Zhang
Journal: Brazilian Journal of Microbiology
Year: 2014
View Abstract | Full Paper Request

26)Title: Molecular characterization of some lignicolous species from fungal culture collection
Author: Stevic Nevena, Capelja Eleonora, Galovic Vladislava, Novakovic Milana, Karaman Maja
Journal: Genetika
Year: 2014
View Abstract | Full Paper Request

27)Title: Next Generation Barcode Tagged Sequencing for Monitoring Microbial Community Dynamics
Author: Katy Breakwell, Sasha G. Tetu, Liam D. H. Elbourne
Journal: Environmental Microbiology
Year: 2014
View Abstract | Full Paper Request

28)Title: Combination of biobarcode assay with on-chip capillary electrophoresis for ultrasensitive and multiplex biological agent detection
Author: Minkyung Cho, Soyi Chung, Jae Hwan Jung, Gi-eun Rhie, Jun Ho Jeon, Tae Seok Seo
Journal: Biosensors and Bioelectronics
Year: 2014
View Abstract | Full Paper Request

29)Title: A rapid low-cost high-density DNA-based multi-detection test for routine inspection of meat species
Author: Chun Chi Lin, Lai Ling Fung, Po Kwok Chan, Cheuk Man Lee, Kwok Fai Chow, Shuk Han Cheng
Journal: Meat Science
Year: 2014
View Abstract | Full Paper Request

30)Title: Genome-Wide Fitness and Genetic Interactions Determined by Tn-seq, a High-Throughput Massively Parallel Sequencing Method for Microorganisms
Author: Tim van Opijnen, David W. Lazinski, Andrew Camilli
Journal: Current Protocols in Molecular Biology
Year: 2014
View Abstract

31)Title: Comparative analysis of bacterial diversity and communities inhabiting the fairy ring of Tricholoma matsutake by barcoded pyrosequencing
Author: M. Kim, H. Yoon, Y.E. Kim, Y.J. Kim, W.S. Kong and J.G. Kim
Journal: Journal of Applied Microbiology
Year: 2014
View Abstract | Full Paper Request

32)Title: Targeted and highly multiplexed detection of microorganisms employing an ensemble of molecular probes
Author: Weihong Xu, Sujatha Krishnakumar, Molly Miranda, Michael A. Jensen, Marilyn Fukushima, Curtis Palm, Eula Fung, Ronald W. Davis, Robert P. St.Onge and Richard W. Hyman
Journal: Applied Environmental microbiology
Year: 2014
View Abstract | Full Paper Request

33)Title: Coelomocyte-derived fluorescence and DNA markers of composting earthworm species
Author: Agnieszka Rorat, Neli Kachamakova-Trojanowska, Alicja Jozkowicz, Jerzy Kruk, Claude Cocquerelle, Franck Vandenbulcke, Michal Santocki andBarbara Plytycz
Journal: Journal of Experimental Zoology Part A: Ecological Genetics and Physiology
Year: 2014
View Abstract | Full Paper Request

34)Title: Advances of DNA-based methods for tracing the botanical origin of food products
Author: Panagiotis Madesis, Ioannis Ganopoulos, Ioannis Sakaridis, Anagnostis Argiriou,Athanasios Tsaftaris
Journal: Food Research International
Year: 2014
View Abstract | Full Paper Request

35)Title: The Impact of Sampler Selection on Characterizing the Indoor Microbiome
Author: Andrew Hoisington, Juan Pedro Maestre, Maria D. King, Jeffrey A. Siegel, Kerry A. Kinney
Journal: Building and Environment
Year: 2014
View Abstract | Full Paper Request

36)Title: Identifying functional anti-Staphylococcus aureus antibodies by sequencing antibody repertoires of patient plasmablasts
Author: Daniel R. Lu, Yann-Chong Tan, Sarah Kongpachith, Xiaoyong Cai, Emily A. Stein,Tamsin M. Lindstrom, Jeremy Sokolove, William H. Robinson
Journal: Clinical Immunology
Year: 2014
View Abstract | Full Paper Request

 

37)Title: Where Taxonomy Based on Subtle Morphological Differences Is Perfectly Mirrored by Huge Genetic Distances: DNA Barcoding in Protura (Hexapoda)
Author: Monika Carol Resch, Julia Shrubovych, Daniela Bartel, Nikolaus U. Szucsich , Gerald Timelthaler, Yun Bu, Manfred Walzl, Günther Pass
Journal: PLoS ONE
Year: 2014
View Abstract | Full Paper Request

38)Title: Comparison of two short DNA barcoding loci (COI and COII) and two longer ribosomal DNA genes (SSU & LSU rRNA) for specimen identification among quarantine root-knot nematodes (Meloidogyne spp.) and their close relatives
Author: Sebastian Kiewnick, Martijn Holterman, Sven van den Elsen, Hanny van Megen, Juerg Ernst Frey, Johannes Helder
Journal: European Journal of Plant Pathology
Year: 2014
View Abstract | Full Paper Request

39)Title: Identification of common cladocerans and calanoids in two south Australian reservoirs using DNA barcoding and morphological analysis: an integrative approach
Author: P. Sharma, M. Elias Gutierrez and T. Kobayashi
Journal: Crustaceana
Year: 2014
View Abstract | Full Paper Request

40)Title: DNA Barcoding on Bacteria: A Review
Author: D. E. Lebonah, A. Dileep, K. Chandrasekhar, S. Sreevani, B. Sreedevi, J. Pramoda Kumari
Journal: Advances in Biology
Year: 2014
View Abstract | Full Paper Request

41)Title: Simultaneous assessment of the macrobiome and microbiome in a bulk sample of tropical arthropods through DNA metasystematics
Author: Joel Gibson, Shadi Shokralla, Teresita M. Porter, Ian King, Steven van Konynenburg, Daniel H. Janzen, Winnie Hallwachs, and Mehrdad Hajibabaei
Journal: Pnas
Year: 2014
View Abstract | Full Paper Request

42)Title: DNA barcoding of brown Parmeliae (Parmeliaceae) species: a molecular approach for accurate specimen identification, emphasizing species in Greenland
Author: Steven D. Leavitt, Theodore L. Esslinger, Eric Steen Hansen, Pradeep K. Divakar, Ana Crespo, Bradley F. Loomis, H. Thorsten Lumbsch
Journal: Organisms Diversity & Evolution
Year: 2014
View Abstract | Full Paper Request

43)Title: 20 years since the introduction of DNA barcoding: from theory to application
Author: Živa Fišer Pecnikar, Elena V. Buzan
Journal: Journal of Applied Genetics
Year: 2014
View Abstract | Full Paper Request

44)Title: The environmental biological signature: NGS profiling for forensic comparison of soils
Author: S. Giampaoli, A. Berti, R.M. Di Maggio, E. Pilli, A. Valentini, F. Valeriani, G. Gianfranceschi, F. Barni, L. Ripani, V. Romano Spica
Journal: Forensic Science International
Year: 2014
View Abstract | Full Paper Request

45)Title: Taxonomic Reference Libraries for Environmental Barcoding: A Best Practice Example from Diatom Research
Author: Jonas Zimmermann, Nelida Abarca, Neela Enk, Oliver Skibbe, Wolf-Henning Kusber, Regine Jahn
Journal: PLoS ONE
Year: 2014
View Abstract | Full Paper Request

_______________________________________________________________________________________________________________

1)Title: A decade's perspective on the impact of DNA sequencing on aquatic hyphomycete research
Author: Sofia Duarte, Sahadevan Seena, Felix Bärlocher, Cláudia Pascoal, Fernanda Cássio
Journal: Fungal Biology Reviews
Year: 2013
View Abstract | Full Paper Request

2)Title: A glimpse into past, present, and future DNA sequencing
Author: Marcos Morey, Ana Fernández-Marmiesse, Daisy Castiñeiras, José M. Fraga, María L. Couce, José A. Cocho
Journal: Molecular Genetics and Metabolism
Year: 2013
View Abstract | Full Paper Request

3)Title: Comparison of ITS1 and ITS2 rDNA in 454 sequencing of hyperdiverse fungal communities
Author: Anna L. Bazzicalupo, Miklós Bálint, Imke Schmit
Journal: Fungal Ecology
Year: 2013
View Abstract | Full Paper Request

4)Title: Construction of a New Molecular Barcode for Discriminating Plants and Animals with a Close Genetic Relationship
Author: Li HUANG, Xiao-feng ZHAO, Yi-peng ZHU, Heng DONG, Ning-ying XU, Jia-shu CAO
Journal: Journal of Integrative Agriculture
Year: 2013
View Abstract | Full Paper Request

5)Title: Cyclin B gene and its cell cycle-dependent differential expression in the toxic dinoflagellate Alexandrium fundyenseAtama Group I/Clade I
Author: Yunyun Zhuang, Huan Zhang, Senjie Lin
Journal: Harmful Algae
Year: 2013
View Abstract | Full Paper Request

6)Title: DNA barcodes for marine fungal identification and discovery
Author: S. Velmurugan, C. Prasannakumar, S. Manokaran, T. Ajith Kumar, A. Samkamaleson, A. Palavesam
Journal: Fungal Ecology
Year: 2013
View Abstract | Full Paper Request

7)Title: Establishing a relationship between bacteria in the human gut and Complex Regional Pain Syndrome
Author: Erin R. Reichenberger, Guillermo M. Alexander, Marielle J. Perreault, Jacob A. Russell, Robert J. Schwartzman, Uri Hershberg, Gail Rosen
Journal: Brain, Behavior and Immunity
Year: 2013
View Abstract | Full Paper Request

8)Title: Metagenomics and Community Profiling: Culture-Independent Techniques in the Clinical Laboratory
Author: Dana Willner, Ph.D., Phil Hugenholtz, Ph.D.
Journal: Clinical Microbiology Newsletter
Year: 2013
View Abstract | Full Paper Request

9)Title: New Paramecium quadecaurelia strains (P. aurelia spp. complex, Ciliophora) identified by molecular markers (rDNA and mtDNA)
Author: Ewa Przybos, Sebastian Tarcz, Eike Dusi
Journal: European Journal of Protistology
Year: 2013
View Abstract | Full Paper Request

10)Title: Parasitological and new molecular-phylogenetic characterization of the malaria parasite Plasmodium tejerai in South American penguins
Author: Patricia Silveira, Nayara O. Belo, Gustavo A. Lacorte, Cristiane K.M. Kolesnikovas, Ralph E.T. Vanstreels, Mário Steindel, José Luiz Catão-Dias, Gediminas Valkiunas, Érika M. Braga
Journal: Parasitology International
Year: 2013
View Abstract | Full Paper Request

11)Title: Phylogenetic relationships among Sarcocystis species in cervids, cattle and sheep inferred from the mitochondrial cytochrome c oxidase subunit I gene
Author: Bjørn Gjerde
Journal: International Journal for Parasitology
Year: 2013
View Abstract | Full Paper Request

12)Title: Using DNA-barcoding for sorting out protist species complexes: A case study of the Nebela tincta–collaris–bohemica group (Amoebozoa; Arcellinida, Hyalospheniidae)
Author: Anush Kosakyan, Fatma Gomaa, Edward A.D. Mitchell, Thierry J. Heger, Enrique Lara
Journal: European Journal of Protistology
Year: 2013
View Abstract | Full Paper Request

_____________________________________________________________________________________________________________

1)Title: A new peptide isolated from a marine derived Streptomyces bacillaris
Author: Hu Y, MacMillan JB
Journal: Natural Product Communications
Year: 2012
View Abstract | Full Paper Request

2)Title: Acinetobacter, Aeromonas and Trichococcus populations dominate the microbial community within urban sewer infrastructure
Author: Vandewalle JL, Goetz GW, Huse SM, Morrison HG, Sogin ML, Hoffmann RG, Yan K, McLellan SL
Journal: Environmental Microbiology
Year: 2012
View Abstract | Full Paper Request

3)Title: Antarctic marine biodiversity and deep-sea hydrothermal vents
Author: Chown SL
Journal: PLoS Biology
Year: 2012
View Abstract | Full Paper Request

4)Title: Archaea of the Miscellaneous Crenarchaeotal Group are abundant, diverse and widespread in marine sediments
Author: Kubo K, Lloyd KG, F Biddle J, Amann R, Teske A, Knittel K
Journal: The ISME Journal
Year: 2012
View Abstract | Full Paper Request

5)Title: Bacterial bioluminescence as a lure for marine zooplankton and fish
Author: Zarubin M, Belkin S, Ionescu M, Genin A
Journal: Proceedings of the National Academy of Sciences of the United States of America
Year: 2012
View Abstract | Full Paper Request

6)Title: Bicyclic C(21) Terpenoids from the Marine Sponge Clathria compressa
Author: Gupta P, Sharma U, Schulz TC, McLean AB, Robins AJ, West LM
Journal: Journal of Natural Products
Year: 2012
View Abstract | Full Paper Request

7)Title: Biodegradation of crude oil using an efficient microbial consortium in a simulated marine environment
Author: Bao MT, Wang LN, Sun PY, Cao LX, Zou J, Li YM
Journal: Marine Pollution Bulletin
Year: 2012
View Abstract | Full Paper Request

8)Title: Bioreactor-based bioremediation of hydrocarbon-polluted Niger Delta marine sediment, Nigeria
Author: Chikere CB, Chikere BO, Okpokwasili GC
Journal: 3 Biotech
Year: 2012
View Abstract | Full Paper Request

9)Title: Cell surface proteome of the marine planctomycete Rhodopirellula baltica
Author: Voigt B, Hieu CX, Hempel K, Becher D, Schlüter R, Teeling H, Glöckner FO, Amann R, Hecker M, Schweder T
Journal: Proteomics
Year: 2012
View Abstract | Full Paper Request

10)Title: Characterization of a marine origin aerobic nitrifying-denitrifying bacterium
Author: Zheng HY, Liu Y, Gao XY, Ai GM, Miao LL, Liu ZP
Journal: Journal of Bioscience and Bioengineering
Year: 2012
View Abstract | Full Paper Request

11)Title: Construction of a Metagenomic Library for the Marine Sponge Halichondria okadai
Author: Abe T, Sahin FP, Akiyama K, Naito T, Kishigami M, Miyamoto K, Sakakibara Y, Uemura D
Journal: Bioscience, Biotechnology, and Biochemistry
Year: 2012
View Abstract | Full Paper Request

12)Title: Corals shed bacteria as a potential mechanism of resilience to organic matter enrichment
Author: Garren M, Azam F
Journal: The ISME Journal
Year: 2012
View Abstract | Full Paper Request

13)Title: Deep-sea bacteria enriched by oil and dispersant from the Deepwater Horizon spill
Author: Baelum J, Borglin S, Chakraborty R, Fortney JL, Lamendella R, Mason OU, Auer M, Zemla M, Bill M, Conrad ME, Malfatti SA, Tringe SG, Holman HY, Hazen TC, Jansson JK
Journal: Environmental Microbiology
Year: 2012
View Abstract | Full Paper Request

14)Title: Deoxyribonucleoside kinases in two aquatic bacteria with high specificity for thymidine and deoxyadenosine
Author: Tinta T, Christiansen LS, Konrad A, Liberles DA, Turk V, Munch-Petersen B, Piškur J, Clausen AR
Journal: FEMS Microbiology Letters
Year: 2012
View Abstract | Full Paper Request

15)Title: Diversity and antibacterial activity of bacteria isolated from the coastal marine sponges Amphilectus fucorum and Eurypon major
Author: Margassery LM, Kennedy J, O'Gara F, Dobson AD, Morrissey JP
Journal: Letters in Applied Microbiology
Year: 2012
View Abstract | Full Paper Request

16)Title: Diversity and Characterization of Culturable Fungi from Marine Sediment Collected from St. Helena Bay, South Africa
Author: Mouton M, Postma F, Wilsenach J, Botha A
Journal: Microbial Ecology
Year: 2012
View Abstract | Full Paper Request

17)Title: Diversity and physiology of culturable bacteria associated with a coastal Antarctic ice core
Author: Antony R, Krishnan KP, Laluraj CM, Thamban M, Dhakephalkar PK, Engineer AS, Shivaji S
Journal: Microbiological research
Year: 2012
View Abstract | Full Paper Request

18)Title: Diversity patterns and activity of uncultured marine heterotrophic flagellates unveiled with pyrosequencing
Author: Logares R, Audic S, Santini S, Pernice MC, de Vargas C, Massana R
Journal: The ISME Journal
Year: 2012
View Abstract | Full Paper Request

19)Title: Enhanced electricity production by use of reconstituted artificial consortia of estuarine bacteria grown as biofilms
Author: Zhang J, Zhang E, Scott K, Burgess JG
Journal: Environmental Science and Technology
Year: 2012
View Abstract | Full Paper Request

20)Title: Fungal endosymbionts of seaweeds
Author: Suryanarayanan TS
Journal: Progress in Molecular and Subcellular Biology
Year: 2012
View Abstract | Full Paper Request

21)Title: Genome sequence of the marine bacterium Vibrio campbellii DS40M4, isolated from open ocean water
Author: Dias GM, Thompson CC, Fishman B, Naka H, Haygood MG, Crosa JH, Thompson FL
Journal: Journal of Bacteriology
Year: 2012
View Abstract | Full Paper Request

22)Title: Genome-scale phylogeny of the alphavirus genus suggests a marine origin
Author: Forrester NL, Palacios G, Tesh RB, Savji N, Guzman H, Sherman M, Weaver SC, Lipkin WI
Journal: Journal of Virology
Year: 2012
View Abstract | Full Paper Request

23)Title: Genomic insights to SAR86, an abundant and uncultivated marine bacterial lineage
Author: Dupont CL, Rusch DB, Yooseph S, Lombardo MJ, Alexander Richter R, Valas R, Novotny M, Yee-Greenbaum J, Selengut JD, Haft DH, Halpern AL, Lasken RS, Nealson K, Friedman R, Craig Venter J
Journal: The ISME Journal
Year: 2012
View Abstract | Full Paper Request

24)Title: Growth of Dunaliella tertiolecta and associated bacteria in photobioreactors
Author: Lakaniemi AM, Intihar VM, Tuovinen OH, Puhakka JA
Journal: Journal of Industrial Microbiology and Biotechnology
Year: 2012
View Abstract | Full Paper Request

25)Title: Heparin-like Entities from Marine Organisms
Author: Colliec-Jouault S, Bavington C, Delbarre-Ladrat C
Journal: Handbook of Experimental Pharmacology
Year: 2012
View Abstract | Full Paper Request

26)Title: Hopanoids in marine cyanobacteria: probing their phylogenetic distribution and biological role
Author: Sáenz JP, Waterbury JB, Eglinton TI, Summons RE
Journal: Geobiology
Year: 2012
View Abstract | Full Paper Request

27)Title: Isolation of Two Novel Marine Ethylene-Assimilating Bacteria, Haliea Species ETY-M and ETY-NAG, Containing Particulate Methane Monooxygenase-like Genes
Author: Suzuki T, Nakamura T, Fuse H
Journal: Microbes and environments / JSME
Year: 2012
View Abstract | Full Paper Request

28)Title: Isolation strategies of marine-derived actinomycetes from sponge and sediment samples
Author: Hames-Kocabas EE, Uzel A
Journal: Journal of Microbiological Methods
Year: 2012
View Abstract | Full Paper Request

29)Title: Magnetococcus marinus gen. nov., sp. nov., a marine, magnetotactic bacterium that represents a novel lineage (Magnetococcaceae fam. nov.; Magnetococcales ord. nov.) at the base of the Alphaproteobacteria
Author: Bazylinski DA, Williams TJ, Lefèvre CT, Berg RJ, Zhang CL, Bowser SS, Dean AJ, Beveridge TJ
Journal: International Journal of Systematic and Evolutionary Microbiology
Year: 2012
View Abstract | Full Paper Request

30)Title: Marine bacterial sources of bioactive compounds
Author: Jaiganesh R, Sampath Kumar NS
Journal: Advances in Food and Nutrition Research
Year: 2012
View Abstract | Full Paper Request

31)Title: Marine crude-oil biodegradation: a central role for interspecies interactions
Author: McGenity TJ, Folwell BD, McKew BA, Sanni GO
Journal: Aquatic Biosystems
Year: 2012
View Abstract | Full Paper Request

32)Title: Marine fungi: their ecology and molecular diversity
Author: Richards TA, Jones MD, Leonard G, Bass D
Journal: Annual Review of Marine Science
Year: 2012
View Abstract | Full Paper Request

33)Title: Marine microgels
Author: Verdugo P
Journal: Annual Review of Marine Science
Year: 2012
View Abstract | Full Paper Request

34)Title: Marine sulfate-reducing bacteria cause serious corrosion of iron under electroconductive biogenic mineral crust
Author: Enning D, Venzlaff H, Garrelfs J, Dinh HT, Meyer V, Mayrhofer K, Hassel AW, Stratmann M, Widdel F
Journal: Environmental Microbiology
Year: 2012
View Abstract | Full Paper Request

35)Title: Marine viruses: truth or dare
Author: Breitbart M
Journal: Annual Review of Marine Science
Year: 2012
View Abstract | Full Paper Request

36)Title: Marine viruses exploit their host's two-component regulatory system in response to resource limitation
Author: Zeng Q, Chisholm SW
Journal: Current biology: CB
Year: 2012
View Abstract | Full Paper Request

37)Title: Microbial Communities Associated with Holothurians: Presence of Unique Bacteria in the Coelomic Fluid
Author: Enomoto M, Nakagawa S, Sawabe T
Journal: Microbes and environments / JSME
Year: 2012
View Abstract | Full Paper Request

38)Title: Microfluidic assay to quantify the adhesion of marine bacteria
Author: Arpa-Sancet MP, Christophis C, Rosenhahn A
Journal: Biointerphases
Year: 2012
View Abstract | Full Paper Request

39)Title: Pathways of carotenoid biosynthesis in bacteria and microalgae
Author: Paniagua-Michel J, Olmos-Soto J, Ruiz MA
Journal: Methods in Molecular Biology
Year: 2012
View Abstract | Full Paper Request

40)Title: Performance of halophilic marine bacteria inocula on nutrient removal from hypersaline wastewater in an intermittently aerated biological filter
Author: Shi K, Zhou W, Zhao H, Zhang Y
Journal: Bioresource Technology
Year: 2012
View Abstract | Full Paper Request

41)Title: Persistence and growth of the fecal indicator bacteria enterococci in detritus and natural estuarine plankton communities
Author: Mote BL, Turner JW, Lipp EK
Journal: Applied and Environmental Microbiology
Year: 2012
View Abstract | Full Paper Request

42)Title: Phycoerythrin evolution and diversification of spectral phenotype in marine Synechococcus and related picocyanobacteria
Author: Everroad RC, Wood AM
Journal: Molecular Phylogenetics and Evolution
Year: 2012
View Abstract | Full Paper Request

43)Title: Pioneer marine biofilms on artificial surfaces including antifouling coatings immersed in two contrasting French Mediterranean coast sites
Author: Briand JF, Djeridi I, Jamet D, Coupé S, Bressy C, Molmeret M, Le Berre B, Rimet F, Bouchez A, Blache Y
Journal: Biofouling
Year: 2012
View Abstract | Full Paper Request

44)Title: Plankton distribution and ocean dispersal
Author: McManus MA, Woodson CB
Journal: The Journal of Experimental Biology
Year: 2012
View Abstract | Full Paper Request

45)Title: Prediction of wastewater dilution and indicator bacteria concentrations for marine outfall systems
Author: Muhammetoglu A, Yalcin OB, Ozcan T
Journal: Marine Environmental Research
Year: 2012
View Abstract | Full Paper Request

46)Title: Pseudovibrio axinellae sp. nov., isolated from an Irish marine sponge
Author: O'Halloran JA, Barbosa TM, Morrissey JP, Kennedy J, Dobson AD, O'Gara F
Journal: International Journal of Systematic and Evolutionary Microbiology
Year: 2012
View Abstract | Full Paper Request

47)Title: Quantification of Microbial Communities in Subsurface Marine Sediments of the Black Sea and off Namibia
Author: Schippers A, Kock D, Höft C, Köweker G, Siegert M
Journal: Frontiers in Microbiology
Year: 2012
View Abstract | Full Paper Request

48)Title: Rapid diversification of coevolving marine Synechococcus and a virus
Author: Marston MF, Pierciey FJ Jr, Shepard A, Gearin G, Qi J, Yandava C, Schuster SC, Henn MR, Martiny JB
Journal: Proceedings of the National Academy of Sciences of the United States of America
Year: 2012
View Abstract | Full Paper Request

49)Title: Scopararanes C-G: New Oxygenated Pimarane Diterpenes from the Marine Sediment-Derived Fungus Eutypella scoparia FS26
Author: Sun L, Li D, Tao M, Chen Y, Dan F, Zhang W
Journal: Marine Drugs
Year: 2012
View Abstract | Full Paper Request

50)Title: Selection and taxonomic identification of carotenoid-producing marine actinomycetes
Author: Romero F, Fernández-Chimeno RI, de la Fuente JL, Barredo JL
Journal: Methods in Molecular Biology
Year: 2012
View Abstract | Full Paper Request

51)Title: Selective grazing by protists upon enteric bacteria in an aquatic system
Author: Domínguez MS, Escalante AH, Folabella AM, Zamora AS
Journal: Revista Argentina de Microbiología
Year: 2012
View Abstract | Full Paper Request

52)Title: Substrate specificity of the recombinant alginate lyase from the marine bacteria Pseudomonas alginovora
Author: Lundqvist LC, Jam M, Barbeyron T, Czjzek M, Sandström C
Journal: Carbohydrate Research
Year: 2012
View Abstract | Full Paper Request

53)Title: The genes and enzymes of phosphonate metabolism by bacteria, and their distribution in the marine environment
Author: Villarreal-Chiu JF, Quinn JP, McGrath JW
Journal: Frontiers in Microbiology
Year: 2012
View Abstract | Full Paper Request

54)Title: Three manganese oxide-rich marine sediments harbor similar communities of acetate-oxidizing manganese-reducing bacteria
Author: Vandieken V, Pester M, Finke N, Hyun JH, Friedrich MW, Loy A, Thamdrup B
Journal: The ISME Journal
Year: 2012
View Abstract | Full Paper Request

55)Title: Two Antimycin A Analogues from Marine-Derived Actinomycete Streptomyces lusitanus
Author: Han Z, Xu Y, McConnell O, Liu L, Li Y, Qi S, Huang X, Qian P
Journal: Marine Drugs
Year: 2012
View Abstract | Full Paper Request

_____________________________________________________________________________________________________________

1)Title: Improved identification of Gordonia, Rhodococcus and Tsukamurella species by 5'-end 16S rRNA gene sequencing
Author: Wang, Tao; Kong, Fanrong; Chen, Sharon; Xiao, Meng; Sorrell, Tania; Wang, Xiaoyan; Wang, Shuo; Sintchenko, Vitali
Journal: Pathology
Year: 2011
View Abstract | Full Paper Request

___________________________________________________________________________________________________________

 

______________________________________________________________________________________________________________________________

 

 

 

<<Next >>

The other Abstracts are available in CDs and will be sent on request (mail id: dzum@envis.nic.in, enviscoordinator@gmail.com)

 
 
Copyright © 2005 ENVIS Centre ! All rights reserved This site is optimized for 1024 x 768 screen resolution Query Form | Feedback | Privacy